Weekly national charts, as the trade papers printed them
| Record | Peak | Weeks | Run |
|---|---|---|---|
| Sugar | |||
| Billboard Mainstream Rock | 28 | 11 | 11/20/99 – 1/29/00 |
| Billboard Modern Rock / Alternative | 31 | 9 | 11/27/99 – 1/22/00 |
| Spiders | |||
| Billboard Mainstream Rock | 25 | 9 | 4/1/00 – 5/27/00 |
| Billboard Modern Rock / Alternative | 38 | 1 | 4/15/00 – 4/15/00 |
| Chop Suey | |||
| Billboard Modern Rock / Alternative | 7 | 35 | 8/4/01 – 3/30/02 |
| Billboard Mainstream Rock | 12 | 29 | 8/4/01 – 2/16/02 |
| Billboard Hot 100 | 76 | 20 | 1/5/02 – 5/18/02 |
| Toxicity | |||
| Billboard Modern Rock / Alternative | 3 | 26 | 1/26/02 – 7/20/02 |
| Billboard Mainstream Rock | 10 | 26 | 2/2/02 – 7/27/02 |
| Billboard Hot 100 | 70 | 13 | 5/4/02 – 7/27/02 |
| Aerials | |||
| Billboard Modern Rock / Alternative | 1 | 26 | 6/15/02 – 12/7/02 |
| Billboard Mainstream Rock | 1 | 33 | 6/22/02 – 2/1/03 |
| Billboard Hot 100 | 55 | 20 | 8/17/02 – 12/28/02 |
| Innervision | |||
| Billboard Modern Rock / Alternative | 12 | 16 | 11/23/02 – 3/8/03 |
| Billboard Mainstream Rock | 14 | 16 | 11/23/02 – 3/8/03 |
| Cigaro | |||
| Billboard Modern Rock / Alternative | 29 | 8 | 2/12/05 – 4/2/05 |
| Billboard Mainstream Rock | 34 | 5 | 2/19/05 – 3/19/05 |
| B.Y.O.B. | |||
| Billboard Modern Rock / Alternative | 4 | 26 | 4/9/05 – 10/1/05 |
| Billboard Mainstream Rock | 4 | 28 | 4/9/05 – 10/15/05 |
| Billboard Hot 100 | 27 | 20 | 4/16/05 – 8/27/05 |
| Question! | |||
| Billboard Mainstream Rock | 7 | 20 | 7/30/05 – 12/10/05 |
| Billboard Modern Rock / Alternative | 9 | 20 | 8/6/05 – 12/17/05 |
| Hypnotize | |||
| Billboard Modern Rock / Alternative | 1 | 25 | 10/22/05 – 4/8/06 |
| Billboard Mainstream Rock | 5 | 23 | 10/22/05 – 3/25/06 |
| Billboard Hot 100 | 57 | 15 | 11/5/05 – 2/18/06 |
| Lonely Day | |||
| Billboard Modern Rock / Alternative | 10 | 20 | 3/4/06 – 7/15/06 |
| Billboard Mainstream Rock | 10 | 20 | 3/4/06 – 7/15/06 |
| Kill Rock 'N' Roll | |||
| Billboard Mainstream Rock | 38 | 5 | 7/8/06 – 8/26/06 |
| Protect The Land | |||
| Billboard Mainstream Rock | 24 | 14 | 11/21/20 – 2/20/21 |